adapted version of slimfast (matlab) Search Results


software slimfast version 16h  (MathWorks Inc)
90
MathWorks Inc software slimfast version 16h
Software Slimfast Version 16h, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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software slimfast version 16h - by Bioz Stars, 2026-03
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matlab implementation slimfast.m  (MathWorks Inc)
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MathWorks Inc matlab implementation slimfast.m
Matlab Implementation Slimfast.M, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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matlab implementation slimfast.m - by Bioz Stars, 2026-03
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csv converter.m matlab script  (MathWorks Inc)
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MathWorks Inc csv converter.m matlab script
Csv Converter.M Matlab Script, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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csv converter.m matlab script - by Bioz Stars, 2026-03
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slimfast custom-written matlab  (MathWorks Inc)
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MathWorks Inc slimfast custom-written matlab
Slimfast Custom Written Matlab, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/slimfast custom-written matlab/product/MathWorks Inc
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slimfast custom-written matlab - by Bioz Stars, 2026-03
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slimfast.m script  (MathWorks Inc)
90
MathWorks Inc slimfast.m script
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Slimfast.M Script, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/slimfast.m script/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
slimfast.m script - by Bioz Stars, 2026-03
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slimfast.m  (MathWorks Inc)
90
MathWorks Inc slimfast.m
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Slimfast.M, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/slimfast.m/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
slimfast.m - by Bioz Stars, 2026-03
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software for localization-based imaging in  (MathWorks Inc)
90
MathWorks Inc software for localization-based imaging in
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Software For Localization Based Imaging In, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/software for localization-based imaging in/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
software for localization-based imaging in - by Bioz Stars, 2026-03
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adapted version of slimfast (matlab)  (MathWorks Inc)
90
MathWorks Inc adapted version of slimfast (matlab)
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Adapted Version Of Slimfast (Matlab), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/adapted version of slimfast (matlab)/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
adapted version of slimfast (matlab) - by Bioz Stars, 2026-03
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matlab-based slimfast script  (MathWorks Inc)
90
MathWorks Inc matlab-based slimfast script
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Matlab Based Slimfast Script, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab-based slimfast script/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab-based slimfast script - by Bioz Stars, 2026-03
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version 2013b  (MathWorks Inc)
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MathWorks Inc version 2013b
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Version 2013b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/version 2013b/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
version 2013b - by Bioz Stars, 2026-03
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slimfast  (MathWorks Inc)
90
MathWorks Inc slimfast
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Slimfast, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/slimfast/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
slimfast - by Bioz Stars, 2026-03
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custom-made matlab script slimfast 4c  (MathWorks Inc)
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MathWorks Inc custom-made matlab script slimfast 4c
Data pipeline for single-molecule tracking with <t>SLIMfast.m</t> (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).
Custom Made Matlab Script Slimfast 4c, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Data pipeline for single-molecule tracking with SLIMfast.m (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).

Journal: STAR Protocols

Article Title: Two-parameter single-molecule analysis for measurement of chromatin mobility

doi: 10.1016/j.xpro.2020.100223

Figure Lengend Snippet: Data pipeline for single-molecule tracking with SLIMfast.m (A) Single-molecule imaging .tif stacks are used as inputs for SLIMfast.m. (B) Screenshots from SLIMfast.m indicating how to load several .tif stacks as a batch to detect molecules in each consecutive frame, as well as the parameters that can be modified by the user depending on the characteristic of the microsope in use (see Notes of the section for details). (C) Screenshot from SLIMfast.m indicating how to load the particle data from the precedent step, for the script to trace single molecule trajectories. An example of the overlay of all detected particles in a nucleus expressing FOXA1-HALO, over the course of 50 s is displayed. (D) Example of trajectories established by the tracking algorithm in a single nucleus over the course of 50 s. A part of the corresponding .csv files is displayed, as provided after conversion by Csv_converter.m. The consecutive columns indicate #1, iteration; #2, frame of detection of the trajectory first step; #3, time = frame × step duration(0.01 s); #4 and #5, x and y coordinates (μm).

Article Snippet: The tracking step here is using the MATLAB-based SLIMfast.m script , a modified version of MTT , both publicly available.

Techniques: Imaging, Modification, Expressing